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I am interested in both fundamental questions in microbial ecology as well as the application of unique microbial species for bioremediation. There are three major areas of interest in my lab:1) the ecophysiology, biochemistry, and molecular biology of dissimilatory metal reducing bacteria, 2) the ecophysiology of phototrophic prokaryotes and 3) the environmental impacts and microbiology of unconventional shale gas extraction. In the first area, I am investigating the reductases and electron transport system of several dissimilatory metalloid reducing bacteria. Respiration using alternative terminal electron acceptors such as arsenic and selenium oxyanions is a relatively new discovery. Ongoing studies include the characterization of the arsenic metabolism in the chemolithoautotroph Alkalilimnicol ehrlichii, selenium oxyanion reduction by Bacillus selenitireducens and Sulfurospirillum barnesii, and the biotransformation of inorganic arsenic and organoarsenicals.The second area involves research on community structure and biogenesis of modern marine stromatolies in the Bahamas and Shark Bay, Australia. The third area involves well water quality testing, GIS base mapping, and microbiological testing of fluids associated with Marcellus shale. The lab is currently funded by grants from the Heinz Endowments and Colcom Foundation. Contact me: stolz@duq.edu
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JOHN F. STOLZ
|
| Department of Biological Sciences, Duquesne University | |
| Pittsburgh, PA 15282 | |
| (412) 396-6333 stolz@duq.edu | |
| Center for Environmental Research and Education | |
| 332 Fisher Hall | |
| (412) 396 4367 | |
| 1989 | MBL Summer Course, Molecular Probes in Marine Ecology. |
| 1988 | Marine Biological Laboratory (MBL) Short Course in Molecular Evolution, Woods Hole. |
| 1980 | NASA Summer Course in Planetary Biology and Microbial Ecology. University of Santa Clara. |
| 1984 | Ph.D., 1, Boston University,
Boston, MA. Thesis: The effects of catastrophic inundation (1977-1983) on the composition and ultrastructure of the stratified microbial community, Laguna Figueroa, Baja California, Mexico. |
| 1977 | B.S. Fordham University, Bronx, NY. |
| 2009 - Pres | Director, Center for Environmental Research and Education |
| 2001 - Pres | Professor - Duquesne University |
| 1999 | Interim Department Chair (7/1-12/31/99) |
| 1996 | Associate Professor, Duquesne University, PA |
| 1992 | Faculty, Environmental Science and Management Program |
| 1990 | Assistant Professor, Duquesne University, PA |
| 1987-1990 | NSF Postdoctoral Fellow in Plant Biology, U. Mass, MA |
| 1984-1986 | Visiting Research Associate, Cal. Inst. Tech., Pasadena, CA |
| 1984-1986 | NRC Research Associate, NASA Jet Propulsion Lab, Pasadena, CA |
| 1980-1984 | Co-director, NASA Planetary
Biology Internship Program, |
FELLOWSHIPS, SCHOLARSHIPS AND AWARDS
2015 - Nobel J Dick Endowed Chair of Community Outreach
2014 - Presidents Award for Excellence in Service to the Mission
2014 - Bayer School Award for Excellence in Service
2013-2015 |
American Society for Microbiology Distinguished Lectureship Program |
| 2014 | Duquesne University Office of Research Hall of Fame (individual) |
| 2010 | Duquesne University Office of Research Hall of Fame (Collaboration) |
| 2008 | Presidents Award for Excellence in Scholarship, Duquesne University |
| 2008 | Excellence in Scholarship, Bayer School of Nat. and Environ. Sciences |
| 2005 | Sabbatical leave (fall) |
| 1998 | Sabbatical leave (fall) |
| 1997 | Presidents Award for Excellence in Scholarship, Duquesne University |
| 1996 | Excellence in Scholarship, Bayer School of Nat. and Environ. Sciences |
| 1987-1990 | National Science Foundation Postdoctoral Fellowship |
| 1984-1986 | National Research Council Research Associateship |
| 1980-1983 | Boston University Teaching Fellowship |
| 1978-1980 | Boston University Graduate Scholarship |
| 1973-1975 | PTSA Scholarship |
| Ph.D. Thesis: | |
| 1997 | Martinez Murillo, F. Nitrato reductasa de la bacteria disimilativa reductora de hierro, Geobacter metallireducens. Purificacion y caracterizacion. Autonema University of Madrid, first reader |
| 2011 | Bansal, R. Molecular analysis of the effects of As(III) on the microbial community of the murine colon |
| 2015 | Reiter, R. Microbial arsenic transformation from subsurface sediments contaminated with arsenic |
Master's Thesis: |
|
| 2018 | Madia, M. Environmental assessment of road brining and injection well for disposal of oil and gas liquid waste |
| 2017 | Manley, L. Water quality analysis of watersheds in Southwestern Pennsylvania |
| 2016 | Umstead, T. Surface and groundwater quality within the Cross Creek watershed May 2015-2016 |
| 2016 | Nolan, C. A decade of unconventional shale gas development in Washington County Pennsylvania and its environmental impact |
| 2015 | Wells, M. Investigating selenium metabolism in Bacillus selenitireducens strain MLS-10 (UNC, Greensboro). |
| 2015 | Mayes, S. Well water quality in Butler County, Pennsylvania in areas with unconventional shale gas extraction usin hydraulic fracturing |
| 2015 | Chen, E. The genomes of three arsenic metabolizing bacteria |
| 2014 | Dugas, O., Isolation and characterization of Salinivibrio sp. strain LP-1 from an impoundment with Marcellus shale waste water |
| 2014 | Bricker, M.S., Detecting the presence of total coliforms and E. coli in private well water in Southwestern Pennsylvania |
| 2013 | Joshi, S.N., Isolation and characterization of a Bacillus firmus strain SWPA-1 from Marcellus shale flowback water |
| 2013 | Alawattegama, S.K., Survey of well water contamination in a rural Southwestern Pennsylvania community with unconventional shale gas drilling |
| 2012 | Rutter, J. A baseline study of chemical parameters and microbial diversity of twostreams in the Ten Mile Creek watershed in southwestern Pennsylvania. |
| 2012 | Eastham, J.L., Enrichment, characterization, and identification of microbial communities found in unconventional shale gas production water |
| 2012 | Zang, N. Chromate reduction by Desulfovibrio desulfuricans strain 27774 |
| 2012 | Jeganathar Kanmanii , N. Arsenic removal by Alkalilimnicola ehrlichii strainMLHE-1 (Anna University, Chennai India) |
| 2008 | Richie, C. Probing the novelties of Alkalilimnicola erhlichii strain MLHE-1T with genomic and proteomic approaches |
| 2007 | Franks, J. Confocal and TEM Analysis of Microbial Communities in Modern Stromatolites at Highborne Cay, Bahamas |
| 2007 | Bansal, R. Denaturing Gradient Gel Electrophoresis (DGGE) analysis of microbial diversity in environments impacted with inorganic or organic arsenic |
| 2007 | Crable, B . Microbial Transformation of 3-Nitro-4-Hydroxybenzene Arsonic Acid (Roxarsone) |
| 2007 | Bird, L. Cloning and Heterologous Expression of the napA gene from Sulfurospirillum barnesii |
| 2006 | Fisher, E. Microbial transformation of arsenic and the characterization of Clostridium sp. strain OhILAs. |
| 2005 | Ranganathan, M. arr genes from arsenate-respiring low G+C Gram positivebacteria Bacillus selenitireducens strain MLS10 and Clostridium sp. strain OhILAs |
2004 |
Thangavelu, M. Development of a biochemical probe for arsenate respiring bacteria. |
| 2003 | Hsieh, T. Dissimilatory nitrate reduction in iron-respiring bacteria. |
| 2002 | Tiwari, S. Development of Biochemical Probes for Sulfurospirillum barnesii strain SES-3 Grown On Arsenic. |
| 2000 | Kuchan, T. The isolation and characterization of a selenate-reducing bacterium. |
| 1999 | Senko, J. Characterization of proteins involved in dissimilatory nitrate reduction by Geobacter metallireducens. |
| 1999 | Cernick, S. A study of the biodegradability of 4-chloro-3-methylphenol by aerobic biological treatment. |
| 1999 | Nath, J.K., Characterization of phototrophic prokaryotes from a coral reef model ecosystem. |
| 1998 | MacLennan, N. The putative heme lyase cytochrome c biogenesis gene from Geobacter metallireducens. |
| 1996 | Donofrio, R., The biodegradability of biodiesel in marine and anaerobic freshwater environments. |
| 1996 | Floro, G., The biodegradability of soy-diesel and soy-diesel/diesel mixtures by Burkholderia cepacia, strain GSOY and Acinetobacter calcoaceticus, strain RAG-1. |
| 1995 | Wade, M.C., A study of the biodegradability of cyclohexylamine and dicyclohexlamine by aerobic biological treatment. |
| 1994 | Soares, M.M., Analysis of the c-type cytochrome genes from Geobacter metallireducens. |
| 1994 | Lin, W., Characterization of the 46 kDa cytochrome c from Geobacter metallireducens. |
| 1994 | Follis, P. Biodegradation of soy diesel. |
| 1993 | Davis, M. Characterization of a dissimilatory iron reducing bacterium by 16s rRNA analysis. |
| 1993 | Cahill, A. Immunohistological characterization of the chlorosomes from green sulfur bacteria. |
| 1992 | Naik, R. Evidence for
a novel nitrate reductase in Geobacter metallireducens.
|
| Non-thesis Master's students: | |
1992 |
Price, N. Ultrastructural studies on the effects of chlorine on the survival rates of Legionella sp. in Hartmenella sp. |
| 2003 | Dawson, A. The isolation and characterization of an arsenate-reducing bacterium from the Ohio River. |
| 2008 | Malinek, D. Vertebrate evolution. |
| Undergraduate Research: | |
| 2017 | McCurdy, M. & Pasewark, S. Microbes from aged produced water |
| 2016 | Wideman, T. Microbes from produced water |
| 2015 | Kuhn, J. Biocide resistance in microbes from produced water |
| 2014 | Jackson, B . Arsenic metabolizing microbes from unconventional well produced water. EPA GRO Fellow |
| 2013 | Hunker, J. Further studies on the of Arx from Alkalilimnicola ehrlichii. Simpson, T. Light microscopy of the microbial community in stromatolites from Shark Bay, Australia Betz, K. Biodigesters as economically feasible sources of natural gas. |
| 2010 | Heaps, S. Microbial roxarsone degradation in the surface, vadose, and hyporheic zones. |
| 2010 | Dudash, M. TEM analysis of the microbial community in the murine proximal, medial, and distal colon. |
| 2009 | Barrows, S. Continued studies on the growth and chromium reduction in Geobacter metallireducens and Sulfurospillum barnesii grown on nitrate and chromium |
| 2009 | Paterson, J. Effects of As(III) on the microbial community of the murine colon by TEM |
| 2008 | Tiito, M. Measurement of As(V) and As(III) in enzyme assays |
| 2008 | Barrows, S. Kinetics of growth and chromium reduction in Geobacter metallireducens and Sulfurospillum barnesii grown on nitrate and chromium |
| 2007 | Williard, S. Effects of arsenic exposure on the microbial community of the murine colon: TEM |
| 2007 | Culbertson, H. Enzymatic assays for periplasmic nitrate reductase |
| 2007 | Park, K. In vitro assay for nitroreductase |
| 2007 | Stefanak. A., Roxarsone transformation by chicken litter |
| 2006 | Culbertson, H. Enzymatic assays for periplasmic nitrate reductase |
| 2006 | Espenshade, J. PCR amplification of napA from Sulfurospirillum barnesii. |
| 2006 | Greenland, N. Microbial degradation of roxarsone. |
| 2006 | Russ, M. Continued studies on the periplasmic nitrate reductase from Sulfurospirillum barnesii. |
| 2005 | Gresock, M. Microbial transformation of 3-amino-4-hydroxybenzene arsonicacid and 4-hydroxybenzene arsonic acid in chicken litter enrichments |
| 2005 | The periplasmic nitrate reductase from Sulfurospirillum barnesii. |
| 2005 | Konechek, C. The microbial degradation of roxarsone in chicken litter |
| 2004 | Thomas, P. Electron donors for the periplasmic nitrate reductase (Nap) from Sulfurospirillum barnesii |
| 2004 | Parihar, J. Expression of Sulfurospirillum barnesii napA in Escherichia coli |
| 2004 | Kilonzo, B. The microbial degradation of roxarsone |
2003 |
Hesse, E. Cloning and expression of the putative metalloid reductase from Sulfurospirillum barnesii. |
| 2003 | Boelte, K. Cellular localization of the respiratory arsenate reductase from Bacillus selenitireducens. |
| 2002 | Smith, M. Evolution of the molybdenum cofactor biosynthetic pathways. |
| 2002 | Hall, J. Amplification, cloning and sequencing of the napA homolog from Sulfurospirillum arsenophilum strain MIT-13. |
| 2002 | Kilonzo, B. Isolation of arsenate respiring bacteria from Kenyan soda lakes. |
| 2000 | Zukas, R., Nitrogen assimilation in the dissimilatory iron-reducing bacterium Geobacter metallireducens. |
| 2000 | Tardio, H., Solubilization and partial purification of the dissimilatory selenate reductase from Sulfurospirillum barnesii SES-3 (NSF REU, Allegheny College). |
| 2000 | Ventrice, C. The Nit- Complementation Assay for the Detection of Molybdoenzymes in Sulfurospirillum barnesii. (NSF REU, St. Vincent College ). |
| 1999 | Nolan, B., Localization of arsenate reductase activity in Bacillus selenitireducens (NSF REU, Notre Dame University). |
| 1999 | Lawrence, S., Kinetics of selenate and nitrate reduction in Sulfurospirillum barnesii (NSF REU, St. Francis College). |
| 1999 | Salsi, J., Transmission electron microscopy of the surface micritic layer from living stromatolites of Highborne Cay, Bahamas. |
| 1998 | Feinstein, T., Transmission electron microscopy of living stromatolites from Highborne Cay, Bahamas. |
| 1998 | Gugliuzza, T., Respiratory selenate reductase from Sulfurospirillum barnesii strain SES-3 (ASM Undergraduate Research Fellow). |
| 1998 | Giacomazzo, B., Differential expression of the 16 kDa protein from Geobacter metallireducens. |
| 1997 | Gugliuzza, T., Kinetics of nitrate and nitrite reduction in Geobacter metallireducens. |
| 1997 | Lee, C., Selective solubilization of cytochromes from Geobacter metallireducens. |
| 1996 | Prinkey, A., Search for a molybdopterin cofactor in the nitrate reductase of Geobacter metallireducens using the Nit- complementation assay. |
| 1996 | Lewarchik, C., Determination of the midpoint potentials of the c-type cytochromes from Geobacter metallireducens . |
| 1996 | 1996 Rafalowski, L., Screening the genomic library from Geobacter metallireducens for genes encoding the 36 kDa protein. |
| 1996 | 1996 Gugliuzza, T., Differential expression of reductases in Geospirillum barnesii. |
| 1995 | 1995 Lewarchik, C., In vivo labeling of cell envelope proteins of Geobacter metallireducens with N-hydroxysuccinate esters of biotin. |
| 1995 | 1995 Rafalowski, L., Screening the genomic library from Geobacter metallireducens for genes encoding the 52 kDa protein. |
| 1995 | Proto, A., Purification of the 28 kDa cytochrome c from Geobacter metallireducens. |
| 1995 | Wertz, K-L., Solubilization studies on the nitrate reductase from the dissimilatory selenate reducing bacterium SeS3. |
| 1994 | Lewarchik, C., Characterization of the 31 kDa cyctochrome c from Geobacter metallireducens. |
| 1994 | Floro, G., Isolation and characterization of a soy diesel degrading bacterium. |
| 1993 | Brosenitsch, T. Ecophysiology of magnetogenic bacteria: studies on nitrate reduction. R.K. Mellon Summer Undergraduate Fellow (from Carlow College) |
| 1992 | Hladycz, J. Applications of the Image 1 image analysis system. |
| 1991 | Jandrasits, L. The ecology of magnetogenic bacteria. R.K. Mellon Summer Undergraduate Fellow (from Penn State U.). |
| 1991 | Smith, B. Assays for iron and nitrate reduction (summer research). |
| NASA Planetary Biology Internship Program (Sponsor): | |
| 2012 | Garcia Weber, D. (Autonema University of Madrid) Mechanism of light dependent arsenite oxidation in Chloroflexus aurantiacus |
| 2009 | Siegert, M. ( Federal Institute for Geosciences and Natural Resources, Hannover) Light dependent arsenite oxidation in Chloroflexus aurantiacus |
| 2007 | Komova, A. Arsenite oxidation by phototrophic prokaryotes (University of Moscow) |
| 2005 | Garcia, A. Molecular approaches to study the diversity of arsenate-respiring prokaryotes (Autonoma University of Madrid) |
| 2004 | Woermer, L., Microbial degradation of organoarsenicals |
2003 |
Zaballos, Milagros, Expression of Bacillus selenitireducens ArrA in Escherichia coli. |
| 2001 | Kovalyova, Irina,
The dissimilatory arsenate reductase from the haloalkaliphilic bacterium Bacillus selenitireducens (Queens University, Kingston Ontario). |
| 1997 | Newman, Dianne, The dissimilatory arsenate reductase from Sulfurospirillum barnesii (Princeton University). |
| 1993 | Wakeford, Tom., Studies on the iron reductase from Geobacter metallireducens (York University, U.K.), |
| 1992 | Murillo, F.M., Studies on the nitrate reductase from Geobacter metallireducens, (Complutense University of Madrid, Spain). |
|
|
| 2013-2014 | Hunkele Dreaded Disease Award: “Colonic Microbial Community Restructuring from Environmental Exposure to Arsenic.” 12/1/13-11/30/14, $3,000 |
| 2005-06 | CURE Grant: Microbial transformation of nitrates derived from tobacco. Co-PI with P. Basu |
| 1991-1992 | Nobel Dick Faculty Development Award, Construction of a genomic library from a dissimilatory iron reducing bacterium $5,000.2/2/91-2/2/92 |
RESEARCH GRANTS (EXTERNAL)
Colcom Foundation: Surveying of water well quality in Western Pennsylvania in areas with unconventional gas well drilling, 9/1/18-8/31/20, $129,000
Heinz Endowments: Well water quality in areas surrounding deep injection wells in Western Pennsylvania. 11/13/17-6/30/19, $48,000
Colcom Foundation: Expanded surveying of water well quality in Western Pennsylvania in areas with unconventional gas well drilling, 8/1/16-7/31/17, $124,700
Heinz Endowments: Expanded surveying of water well quality in Western Pennsylvania in areas with unconventional gas well drilling 1/1/17-12/31/17, $48,000
Colcom Foundation: Continued survey of drinking water well quality in areas with unconventional gas well drilling, 6/1/14-6/30/16, $110,720
Heinz Endowments: Continued survey of drinking water well quality in areas with unconventional gas well drilling, 2/1/14-6/30/16, $110,720
WVU Water Resources Institute and Center. 3 Rivers Quest – lower Allegheny River Monitoring. 1/7/13-1/31/14. $100,000
WVU Water Resources Institute and Center. 3 Rivers Quest – lower Allegheny River Monitoring Mini Grants. 1/7/13-1/31/14. $29,448
Colcom Foundation: Survey of drinking water well quality in areas with unconventional gas well drilling, 6/1/12-6/30/15, $134,820
Heinz Endowments: Survey of drinking water well quality in areas with unconventional gas well drilling, 6/1/12-6/30/15, $134,820
| 2010 | Baseline Studies to Determine Marcellus Shale Field Development Effects on Environmental Variables and Ecological Receptors: Microbe, Fish, and Salamander Community Survey, 6/1/10-5/31/11, $87,320 |
| 2009-2011 | NIEHS-ARRA: Mechanisms for Arsenic Induced Vascular Disease. Co-PI with A. Barchowsky, $244,920 |
| 2009-2013 | NASA Exobiology: Investigating alternative biogeochemical redox cycles in volcanic, hypersaline, environments. Co-PI with R.S. Oremland, $128,000 |
| 2009-2011 | NSF MRI: Acquisition of a Scanning Electron Microscope for Imaging and Elemental Analysis in Research at Duquesne University (co-PI) $339,379 |
| 2007-10 | NSF GEG: Collaborative Research: Biogeochemical controls on the dynamics of organoarsenic transformation (Co-PI with M. Schreiber (PI), P. Basu) |
| 2007-10 | DOE ESRP: Nitrate enhance Cr(VI) reduction. $449,972 |
| 2007-10 | NASA Exobiology: Investigating alternative biogeochemical redox cycles in volcanic, hypersaline, environments. Co-PI with R.S. Oremland,$84,000 |
| 2006-11 | NIEHS: Columbia University Superfund Biogeochemistry Core. Subcontract. $63,157 |
| 2003-05 | NSF US/Egypt Cooperative Research: Microbial arsenic and selenium transformation in the Nile Delta, $14,000 |
| 2003-2007 | NSF Biocomplexity of marine stromatolites: microbial population dynamics, and mineral formation in a three billion year old ecosystem. Co-PI with P.Reid, 1/1/03-12/31/07, $121,602. |
| 2002-2005 | NASA Exobiology: Investigating alternative biogeochemical redox cycles in volcanic, hypersaline, environments. Co-PI with R.S. Oremland, 7/31/02-6/30/05, $36,000 |
| 2001-2003 | USGS-NIWR Enrichment, Biochemical, and Molecular Techniques for Assessing Arsenic Reduction 9/1/01-8/31/03, $218,096 |
| 2000-2003 | DOE-NABIR Stabilization of Heavy Metal Contaminants in Subsurface Environments, $45,000 subcontract; 10/1/00-9/30/03 (pending) |
| 2000-2002 | USDA Microbial transformation of arsenate and selenate $110,000 11/15/00-10/31/02 |
| 1998-Open | GMS
Technologies, applied fermentation processes, open contract beginning
5/1/98. |
| 1998-1999 | NSF Research Opportunity Award, With P. Reid, University of Miami.Microstructure in Modern Marine Stromatolites: A Geomicrobiological Investigation of Processes Forming Lithified Miciritic Laminae 4/1/98-10/1/99, $12,600. |
| 1997-2000 | EPA, The biochemistry and molecular biology of arsenate and selenate transformation, 9/1/97-8/31/2000, $273,119. |
| 1997 | Applied CarboChemicals, Pittsburgh PA, 6/1/97-12/31/97, $15,000. |
| 1996-Pres | Bayer Biocide Screening Project. Open contract 2/1/96-Present. |
| 1996-1997 | NSF, RUI supplement $9,815, 9/1/96-12/31/97. |
| 1995-1996 | National Science Foundation, co-PI with O. Adeyeye, J. Doctor, M. Alleman, J. Garey and F. Gorga. RUI: Aquisition of a scintillation counter, an automated DNA sequencer, and a high speed centrifuge, $112,000, 2/1/95-7/31/96. |
| 1994-1997 | National Science Foundation, co-PI with J. Garey, Undergraduate Research in Biological Sciences at Duquesne University, $110,000, 5/1/94-4/30/97. |
| 1993-1996 | USDA. Biodegradation of synthetic diesel. $209,000, 10/1/93-8/31/96. |
| 1993-1996 | National Science Foundation, Characterization of the novel nitrate reductase from Geobacter metallireducens, $216,000 7/15/93 - 6/30/96. (extended 12/31/97). |
| 1992-1995 | National Science Foundation, Co-PI with Dr.s Doctor, Garey, and Adeyeye, Introducing modern investigative laboratories in cellular, genetic, and developmental biology to undergraduates at Duquesne University, $20,812 (with $20,812 matching), 7/1/92-6/30/95. |
| 1992-1993 | McKinley Foundation, Pymatuning Ecology Center, University of Pittsburgh, Invertebrate-microbe interaction in a stream ecosystem, $6,500, 9/15/92-9/14/93. |
| 2017 | |
| 2016 | |
| 2015 | |
| 2014 | |
| 2013 | Stolz, J.F, Oremland, R.S., Switzer Blum, J., Hoeft McCann, S., Baesman, S.M., Bennett, S., Miller, L.G., Kulp, T.R., and Saltikov, C. 2013 Arsenic, Anaerobes, and Astrobiology. AGU fall meeting, San Francisco. Stolz, J.F., Eastham, L., Rutter, J., Dugas, O., Joshi, S., Basu, P., Bain, D., and Kondratyuk, T. 2013. Chemical Composition and Microbial Diversity of Fluids Associated with Marcellus Shale Gas Extraction GSA fall meeting, Denver |
| 2010 | Chovanec, P., Sparacino-Watkins, C., Basu, P., and Stolz, J.F. 2010. Proteome changes induced by chromate under nitrate reducing conditions in Geobacter metallireducens and Desulfovibrio desulfuricans. DOE-ERSP PI’s annual meeting, Washington DC, meeting abstracts. |
| Chovanec, P., Sparacino-Watkins, C., Basu, P., and Stolz, J.F. 2010. Proteome changes induced by chromate exposure in Geobacter metallireducens. American Society for Microbiology, San Diego CA, general meeting abstracts I-3058 | |
| Siegert, M., Chovanec, P., and Stolz J.F. 2010. Anaerobic oxidation of arsenite by the phototroph Chloroflexus aurantiacus. German Association fo Microbiology, spring meeting, Hannover, Germany B051 | |
| 2009 | Basu, P., Bhat, V., Chovanec, P., and Stolz, J.F. 2009. Proteomic investigation of microbial transformation of roxarsone. 57th ASMS Conference on Mass Spectrometry and Allied Topics, Philadelphia, PA. MP 539. |
| Chovanec, P., Sparacino-Watkins, C., Basu, P., and Stolz, J.F. 2009. Chromate reduction under nitrate reducing conditions by three nitrate respiring bacteria. American Society for Microbiology (May 17-21), General Meeting abstracts | |
Wagner, P.J., Mailloux, B.J., Foster, R., Stolz, J.F., Scholz, M., Wovkulich, K.,Keimowitz, and Freyer, G., 2009. Worldwide Diversity and Occurrence of Arsenite Transporter acr3(2) Suggests An Important and Overlooked Pathway. American Society for Microbiology (May 17-21), General Meeting abstracts |
|
70. Chovanec, P., Sparacino-Watkins, C., Basu, P., and Stolz, J.F. 2009. Chromate reduction under nitrate reducing conditions in Geobacter metallireducens, Sulfurospirillum barnesii, and Desulfovibrio desulfuricans. DOE ERSP PI’s annual meeting, Leedsdale VA, April 20-22 |
|
| 2008 | 68. Mailloux, B. J., Alexandrova, E., Keimowitz, A., Wovkulich, K., Stolz, J. F., Kenna, T., Pichler, T., Polizzotto, M., Dong, H., Radloff, K. A., and van Geen, A., 2008. Microbial Mineral Weathering for Nutrient Acquisition Releases Arsenic. Eos Trans. AGU89, Fall Meet. Suppl., Abstract H41E-0914. |
67. Decho, A.W., Visscher, P.T., Braissant, O., Dupraz, C., Norman,R.S., Reid, R.P., and Stolz, J. 2008. An Emerging Framework for Understanding Marine Stromatolite Formation. Kalkowsky Symposium, Gottingen, Germany, Oct. |
|
66. Reid, R.P., Bowlin, E., Gaspar, A.P., Andres, M.S., Macintryre, I.G., Stolz, J.F. 2008. Two years in the life of a stromatolite, Highborne Cay, Bahamas: Assessing the Role of Algal Eukaryotes in Stromatolite Formation. Kalkowsky Symposium 2008, Gottingen, Germany, Oct. 2008. |
|
Wagner, P.J., Mailloux, B.J., Foster, R., Stolz, J.F., Scholz, M., Wovkulich, K.,Keimowitz, A., Lanoil, B., Van Geen, A., and Freyer, G., 2008. Worldwide Diversity and Occurrence of Arsenite Transporter acr3(2) Suggests An Important and Overlooked Pathway. Geological Society of America meeting abstracts |
|
Alexandrova, E., Mailloux, B.J., Keimowitz, M., Stolz, J.F., Kenna, T., Polizzotto, M., Pichler, T., and van Geen, A., 2008. Microbial mineral weathering for nutrient acquisition releases arsenic. Geological Society of America meeting abstracts. |
|
Stolz, J.F., Richey, C., Chovanec, P., Hoeft, S., Oremland, R.S., and Basu, P. 2008, The arsenic genome reveals striking conformity and diversity in arsenic metabolizing bacteria. International Society for Microbial Ecology,meeting abstracts |
|
62. Franks, J., Reid,R.P., Underwood, G., Paterson, D., Aspden, R., and Stolz, J.F. 2008. Role of Diatoms in the Biogenesis of Modern Marine Stromatolites at Highborne Cay, Bahamas. International Society for Microbial Ecology, meeting abstracts. |
|
Bansal, R., Williard, S., Straub, A., Barchowsky, A., Stolz, D.B., and Stolz, J.F., 2008. The Affect of As(III) on the Microbial Community Structure of the Murine Colon. International Society for Microbial Ecology, meeting abstracts. |
|
Sparacino, C., Chovanec, P., Stolz, J.F., and Basu, P. 2008. Structure prediction and purification of periplasmic nitrate reductase from Sulfurospirillum barnesii. American Chemical Society Meeting Abstracts. |
|
Chovanec, P., Stolz, J.F., and Basu, P. 2008. Towards elucidating the mechanism of roxarsone biotransformation: a proteomic investigation. American Chemical Society Meeting Abstracts. |
|
Richey, C., Chovanec, P., Hoeft, S., Oremland, R.S., Basu, B., and Stolz, J.F., 2008. A Proteomic Profile of a Novel Arsenite Oxidizing Bacterium Alkalilimnicola ehrlichii strain MLHE-1T. American Society for Microbiology Meeting Abstracts. |
|
Bansal, R., Williard, S., Straub, A., Barchowsky, A., Stolz, D.B., and Stolz, J.F., 2008. The Affect of As(III) on the Microbial Community Structure of the Murine Colon. American Society for Microbiology Meeting Abstracts. |
|
| Chovanec, P., Basu, P., and Stolz, J.F. 2008 Nitrate enhanced chromate reduction. DOE ERSP PI’s Annual Meeting Abstracts | |
| 2007 | Stolz, J.F., 2007 Probing for the Activities of Arsenic and Seleniu Metabolizing Microbes. American Geophysical Union, Fall meeting. |
Crable, B., E. Perera, P. Basu, and J.F. Stolz, 2007 Transformation of 3-Nitro-4-Hydroxybenzene Arsonic Acid by Clostridium sp. strain OhILAs. American Society for Microbiology Meeting Abstracts |
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Franks, J., P. Reid, G. Underwood, D. Paterson, R. Aspden, and J.F. Stolz, 2007 Confocal and TEM Analysis of Diatoms from the Modern Marine Stromatolites at Highborne Cay, Bahamas. American Society for Microbiology Meeting Abstracts |
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J. F. Stolz, The Joint Genome Institute, R. Tabita, B. Witte, G. King, J. M. Santini, J. S. Hoeft, C. Richie, P. Basu, R.S. Oremland. 2007. The Genome of the Arsenite Oxidizing Gammaproteobacterium Alkalilimnicola ehrlichii Joint Genome Institute Users Meeting Abstracts |
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Hoeft, S.E., J. Switzer Blum, R. Tabita, B. Witte, J.F. Stolz, and R.S. Oremland. 2007 .Diversity of Arsenate-Respiring Bacteria Isolated from Extreme Environments: Reconciling Observations of their Biochemistry with Partially Annotated (or Un-annotated) Genomes. Joint Genome Institute Users Meeting Abstracts |
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| 2006 | Stolz, J.F., Fisher, E., Polshnya, G., Berekaa, M, Garcia, A., Thangavelu, M., and Basu, P. Methods for detection of arsenic metabolizing bacteria. Geological Society of America meeting abstracts. |
Basu, P; Stolz, JF.; Barchowsky, A; Ghosh, R; Perera, E; Klei, L; Straub, A; Kilonzo, B; Fisher, E; Wormer, L. Roxarsone, its microbial transformation and potential for angiogenesis. American Chemical Society, Division ofEnvironmental Chemistry 46(1), 797-798. |
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| 2005 | Stolz, J.F. Microbial Transformation of Inorganic and Organic Arsenic.Geological Society of America, Annual Meeting Abstracts. |
Oremland et al., Arsenophilic bacterial processes in Searles Lake: a salt- saturated, arsenic-rich, alkaline soda lake. AGU |
|
Perera, E., Kilonzo, B., Fisher, E., Wormer, L., Stolz, J.F., and Basu, P. Microbial transformation of roxarsone (4-hydroxy-3-nitro-phenylarsonic acid)ICBIC meeting abstracts. |
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| Stolz, J.F., Perera, E., Kilonzo, B., Fischer, E., Woermer, L., and Basu, P. The microbial degradation of roxarsone. The Joint International Symposia for Subsurface Microbiology and Environmental Biogeochemistry (ISEB XVII) | |
| 2004 | J Switzer Blum, SE Hoeft, JF Stolz, S Langley, TJ Beveridge, TR Kulp, and RS Oremland. 2004 The arsenic cycle in Searles Lake CA: An arsenic-rich, salt saturated soda lake. II. Isolation of arsenic-metabolizing microbes. American Geophysical Union fall meeting. Special symposium on arsenic. |
| JF Stolz, 2004 Microbial transformation of arsenic. American Geophysical Union fall meeting. Special symposium on arsenic. | |
| 2003 | JF Stolz, Microbial transformation of arsenic: Diversity and biochemistry. American Society of Agronomy, Crop Science Society of American, and Soil Science Society of American annual meeting. |
| JF Stolz, E. Afkar, J. Lisak, C. Saltikov, R.S. Oremland, and P. Basu 2003 The respiratory arsenate reductase from the haloalkaliphile Bacillus selenitireducens: a molybdoenzyme that functions at high pH and salinity. Gordon Research Conference. | |
| Afkar, E. , Saltikov, C., Lisak, J., Basu, P., Oremland, R.S., and Stolz, J.F. 2003. Purification and characterization of the respiratory arsenate reductase from Bacillus selenitireducens. ASM meeting abstracts. | |
| E Fisher, A Dawson, J Lisak, G Polshyna, P Basu and JF Stolz, 2003. Enrichment, isolation, and characterization of a Clostridium species that respires arsenate and selenite ASM meeting abstracts. | |
| 2002 | Herbel, M.J., J. Switzer Blum, S.E. Hoeft, S.M.Cohen, L.L. Arnold, J.F. Stolz, and R.S. Oremland 2002 Arsenate Reductase Activity and Arsenate Respiring Bacteria in the Gastrointestinal Tracts of Animals. ASM meeting abstracts. |
| Afkar, E., Saltikov, C., D. Newman, B. Kail, R.S. Oremland, and J.F. Stolz 2002. The multimeric nature of the arsenate reductase from Sulfurospirillum barnesii strain SES-3. ASM meeting abstracts. | |
| Kovalyova,I., E. Afkar, R.S. Oremland,, J.F. Stolz 2002. Respiratory Arsenate Reductase from the haloalkaliphilic bacterium Bacillus selenitireducens ASM meeting abstracts. | |
| Tiwari, S., J. Lisak, E. Afkar, B. Kail, D. Newman, and J.F. Stolz 2002. Development of biochemical and molecular probes for the detection of Sulfurospirillum-type dissimilatory arsenate reduction. ASM meeting abstracts. | |
| 2001 | Stolz, J.F., 2001. Microbial transformation of elements: the cases for arsenic and selenium International Symposium on "New Frontiers in Microbial Ecology",Fundación Ramón Areces, Barcelona, December 11-12. |
| Stolz, J.F. 2001. Structure of marine biofilms. Hanse Institute for Advanced Study Workshop: Fossil and Recent Biofilms, Oldenberg, Germany, February 17-21. | |
| 1999 | Reid,P., Bebout, B., Decho, A., Macintyre, I., Pearl, H., Pinckney, J., Prufert- Bebout, L., Steppe, T., Stolz, J.F., and Visscher, P. 1999 Microbial heaven in a fringing reef, Highborne Cay Bahamas. GSA General Meeting, Denver, CO. |
| Stolz, J.F., and Oremland, R.S., 1999. Bacterial respiration of arsenic and selenium oxyanions. ASM Conference on Microbial Biodiversity, Chicago IL, August 5-8 | |
| Oremland, R.S., J. Switzer Blum, A. Burns Bindi, P. Dowdle, M. Herbel, and J.F. Stolz, 1999. Dissimilatory reduction of submillimolar selenate in the presence of nitrate by cell suspensions and membrane fractions of Sulfurospirillum barnesii SES3. ASM General Meeting, Chicago IL May 31- June 3, abstract N15. | |
| Switzer Blum, J., Burns Bindi, A., Stolz, J.F., Oren, A., and Oremland, R.S., 1999. Description of a halophilic selenate-respiring bacterium isolated from the Dead Sea: strain DSSe-1. ASM meeting abstracts. | |
| MacLennan, N., J. Buzzelli, and J.F. Stolz, 1999. Cloning and sequencing of a putative cytochrome c heme lyase gene (ccsA) from Geobacter metalli- reducens, ASM General Meeting, Chicago IL, May 30- June 3, abstract K-8. | |
| 1998 | Stolz, J.F., T. Gugliuzza, and R.S. Oremland, 1998. The effects of tungstate on the growth and enzymatic activity of the dissimilatory selenate reducing bacterium Sulfurospirillum barnesii, ASM General Meeting, Atlanta GA, May 17-21, abstract K-64. |
| 1997 | Stolz, J.F., Gugliuzza, T., and Martinez Murillo, F., 1997. Cytochromes and reductases from Geospirillum barnesii. ASM meeting abstracts. |
| 1996 | Stolz, J.F., Donofrio, R., Floro, G., Davis, M., Buzzelli, J., and Griffin, W.M., 1996. Biodegradation of Soy Diesel by Species of Burkholderia, Pseudomonas, and Acinetobacter. ASM meeting abstracts. |
| Martinez Murillo, F. and Stolz, J.F., 1996 Evidence for the presence of bacterioferritin in Geobacter metallireducens, strain GS-15 and its association with the nitrate reductase. ASM meeting abstracts. | |
| 1995 | Stolz, J.F. and Martinez
Murillo, F., 1995. Novel Nitrate Reductase from the Dissimilatory
Iron Reducing Bacterium Geobacter metallireducens. Proceedings of the Beijerink Centennial, the Haque, The Netherlands p. 260. |
| Follis, P., Floro, F., Buzzelli, J., Griffin, W.M., and Stolz, J.F., 1995. Biodegradation of soy diesel in freshwater and soil microcosms. ASM meeting abstracts, p 421. | |
| Murillo, F.M., and Stolz, J.F., 1995. Characterization of the nitrate/nitrite reductase of Geobacter metallireducens GS-15. ASM meeting abstracts, p. 558. | |
| 1994 | Cahill, A.D. and Stolz, J.F., 1994. Polyclonal antibodies to chlorosome proteins as probes for green sulfur bacteria. VIII Internation Symposium on Phototrophic Prokaryotes, Urbino, Italy, program abstracts. |
| 1993 | Stolz, J.F., 1993. Light and Electron Microscopy in Microbial Mat Research: An Overview. Proceedings NATA Microbial Mat meeting, Arcachon, France. |
| Cahill, A., and Stolz, J.F., 1993. The use of polyclonal antibodies as a probe for green sulfur bacteria. ASM meeting abstracts. | |
| Stolz, J.F., 1993. Microbial Transformations in the Forest: Implications for Geophysical Systems. AAAS meeting abstracts. | |
| 1992 | Stolz, J.F., 1992. Magnetogenic bacteria and the microbial iron cycle. Sixth International Symposium on Microbial Ecology, program abstracts pg 72. |
| Stolz, J.F. and Naik, R.R., 1992. The nitrate reductase from Geobacter metallireducens strain GS-15. ASM abstracts. | |
| Stolz, J.F. and Naik, R.R., 1992. The reductases of Geobacter metallireducens GS-15. American Chemical Society. | |
| 1989 | Stolz, J.F., 1989. Biogenic magnetite and the magnetization of sediments. American Chemical Society GEOC pg 81. |
| Stolz, J.F., Redlinger, T.E., and Fuller, R.C., 1989. Chlorosomes of bacteriochlorophyll e containing green bacteria. ASM abstracts pg 244. | |
| 1988 | Stolz, J.F., and King, J.W., 1988. Magnetite forming bacteria and the magnetization of sediments. EOS 69:1159. |
| 1987 | Chang, S-B.R., Kirschvink, J.L., and Stolz, J.F., 1987. Bacterial magnetite in modern and ancient sediments. GSA Abstract Program 19:617. |
| Haggerty, S.E., Stolz, J.F., and Toft, P.B., 1987. Morphology of bacterial magnetosomes: strange magnetite. EOS 68:297. | |
| 1986 | Stolz, J.F., Chang, S-B.R., and Kirschvink, J.L., 1986. Biogenic magnetite as trace fossil and paleooxygen indicator. Origins of Life 16:395. |
| 1985 | Nicholson, J.A.M., Pierson, B.K., and Stolz, J.F., 1985. Structure of a microbial mat in a salt marsh. EOS 66:1316. |
| Stolz, J.F., Chang, S-B.R.,
and Kirschvink, J.L., 1985. Occcurrence of magnetotactic bacteria and ultrafine grained magnetite in surface sediments from the Santa Barbara Basin. EOS 66:897. |
|
| Stolz, J.F., Chang, S-B.R.,
and Kirschvink, J.L., 1985. Occcurrence of magnetotactic bacteria and ultrafine grained magnetite in surface sediments from the Santa Barbara Basin. EOS 66:897. |
|
| 1982 | Margulis, L., and Stolz,
J.F., 1982. Microbial mats and early evolution. First Symposium
on Chemical Evolution and the Origin of Life. NASA Conference Publication 2276, Washington DC, pg. 92. |
| 1980 | Stolz, J.F., 1980. The isolation
and characterization of the fungal component of Metallogenium symbioticum.
Laboratory of Chemical Evolution Workshop, C. Ponnamperuma (ed.), LCE Press, College Park, MD, pg. 24. |
Stolz, J.F.1980."Evaporite
Flats. In "NASA Workshop on Global Ecology" M.N. Dastoor,
L. Margulis, and K. Nealson (eds.) NASA Publications, Washington |
2018
2017 |
Stolz, J.F. and Basu, P. 2018 Unraveling the inner workings of respiratory arsenate reductase. Proc. Nat. Acad. Sci. 115:9051-9053. Suosaari, E.P., Awramik, S.M., Reid, R.P., Stolz, J.F., and Grey, K. 2018. Living dendrolitic microbial mats in Hamelin Pool, Shark Bay, Western Australia. Geosciences 8:212-228. doi:10.3390/geosciences8060212 COVER Oremland, R.S., Saltikov, C., Stolz, J.F., and Hollibaugh, J.T. 2017. Autotrophic microbial aresenotrophy in arsenic-rich soda lakes. FEMS Microbiol. Ecol. 15:364-374. **Received Outstanding Review Recognition by FEMS** Hoeft McCann, S., Conrad, A., Hernandez-Maldonado, J., Stoneburner, B., Saltikov, C., Stolz, J.F., and Oremland, R.S., 2017. Arsenite as an electron donor for anoxygenic photosynthesis: Description of three strains of Ectothiorhodospira from Mono Lake, California and Big Soda Lake, Nevada. Life 7(1) 1/ doi 10.3390/life7010001 Stolz, J.F. 2017. Gaia and her microbiome. FEMS Microbiol. Ecol. 10.1093/femsec/fiw247 |
| 2016 | Switzer Blum, J., Hoeft McCann, S., Bennett, S., Miller, L.J., Stolz, J.F., Stoneburner, B., Saltikov, C. & Oremland R.S. 2016: A microbial arsenic cycle in sediments of an acidic mine impoundment: Herman Pit, Clear Lake, California., Geomicrobiology Journal, DOI:10.1080/01490451.2015.1080323 Suosaari, E.P., Reid, R.P., Playford, P.E., Foster,J.S., Stolz, J.F., Casaburi, G., Hagan, P.D., Chirayath, V., Macintyre, I.G., Planavsky, N.J., and Eberli, G.P. 2016. New multi-scale perspectives on the stromatolites of Shark Bay, Western Australia.Sci. Rep. | 6:20557 | DOI: 10.1038/srep20557. Mason, D.M., Nouraei, N., Pant, D.B., Miner K.M., Hutchison, D.F., Luk, K.C., Stolz, J.F., and Leak, R.K. 2016. Transmission of a-synucleinopathy from olfactory structures deep into the temporal lobe. Mole. Neurodegen. 11:49 DOI: 10.1186/s13024-016-0113-4. |
| 2015 | Stolz, J.F. 2015. Foreward. Special issue for “Facing the Challenges”. Environ Sci and Health, Part A 50:433. Lampe, D.J., and Stolz, J.F. 2015. Environmental impacts of unconventional shale gas extraction in the Appalachian Basin. Environ Sci and Health, Part A 50:434-446. Alawattegama, S., Kondratyuk, T., Krynock, R., Bricker, M., Bain, D., and Stolz, J.F. 2015. Well water contamination in a rural community in Southwestern PA with unconventional shale gas extraction. Environ Sci and Health, Part A 50:516-528. Ying, L., O’Conner, F., and Stolz, J. 2015. Scintillation Gamma Spectrometer for analysis of hydraulic fracturing waste water. Environ Sci and Health, Part A 50:511-515. Dheer, R., Patterson, J., Dudash, M., Nmezi, B., Stolz, D.B., Stachler, E., Bibby, K., Barchowsky, A., and Stolz, J.F. 2015. Arsenite induced changes in the microbiota of the murine colon. Toxicol Appl Pharmacol. 2893:397-408. doi: 10.1016/j.taap.2015.10.020. |
| 2014 | Thomas, J.A., Chovanec, P., Stolz, J.F., and Basu, P. 2014. Mapping the protein profile involved in the biotransformation of organoarsenicals using an arsenic metabolizing bacterium. Metallomics DOI: 10.1039/c4mt00185k Sparacino-Watkins, C, Stolz, J.F., and Basu, P. 2014. Nitrate and periplasmicnitrate reductase. Chemical Society Reviews 43:676-706 DOI: 10.1039/c3cs60249d |
| 2013 | Tarhan, L.G., Planavsky, N.J., Laumer, C.E., Stolz, J.F., and Reid, R.P. 2013. Microbial mat controls of infaunal abundance and diversity in modern marine stromatolites. Geobiology 11:485-497 DOI 10.1111/gbi.12049 |
| 2012 | Chovanec, P., Sparacino-Watkins, C., Zhang, N., Basu, P., and Stolz, J.F. 2012. Microbial reduction of chromate in the presence of nitrate by three nitraterespiring organisms. Frontiers Microbiol Chem 3:416 DOI:10.3389/fmicb.2012.00416 |
| 2012 | Switzer Blum, J, Kulp, T.R., Han, S., Lanoil, B., Saltikov, C.W., Stolz, J.F., Miller, L.G., and Oremland, R.S. 2012. Desulfonatronovibrio arsenativorans sp. nov., an extremely halophilic sulfate- and arsenate-respiring bacterium fromSearles Lake, California. Extremophiles 16:727-42 doi: 10.1007/s00792-012-0468-6 |
| 2012 | Perkins, R.G., Mouget, J-L., Kromkamp, J.C., Stolz, J.F., and Reid, R.P. 2012. Modern stromatolite biogenesis: the dominant role of cyanobacteria explained using variable chlorophyll fluorescence. FEMS Microbiol. Ecol. 82:584-596 DOI: 10.1111/j.1574-6941.2012.01421.x |
| 2012 | Zargar, K., Conrad, A., Bernick, D.L., Lowe, T.M., Stolc, V., Hoeft, S., Oremland, R.S., Stolz, J., and Saltikov, C.W. 2012. ArxA, a new clade of arsenite oxidase within the DMSO reductase family of molybdenum oxidoreductases. Environmental Microbiology 14:1635-45 10.1111/j.1462-2920.2012.02722.x. |
| 2010 | Wolfe-Simon,F., Switzer Blum, J., Kulp, T.R., Gordon, G.W., Hoeft, S.E., Pett-Ridge, J., Stolz, J.F., Webb, S.M., Weber, P.K., Davies, P.C.W., Anbar, A.D., and Oremland, R.S. 2010 A bacterium that can grow by using arsenic instead of phosphorus. Science DOI: 10.1126/science.1197258 |
| 2010 | Stolz, J.F., Basu, P., and Oremland, R.S. 2010. The microbial transformation of arsenic: new twists on an old poison. Microbe 5:53-59 |
| 2010 | Chovanec, P., Stolz, J.F., and Basu, P. 2010. A proteome investigation of roxarsone degradation by Alkaliphilus oremlandii strain OhILAs. Metallomics 2:133-139, DOI: 10.1039/B915479E |
| 2009 | Franks, J. and Stolz, J.F., 2009. Flat Laminated Microbial Mat Communities. Earth Sci. Revs. 96:163-172 |
| 2009 | Oremland, R.S., Saltikov, C.W., Wolfe-Simon, F., and Stolz, J.F. 2009. Arsenic in the evolution of Earth and extraterrestrial ecosystems. Geomicrobiol. J. 26:1-15 |
| 2009 | Baesman, S., Stolz, J.F., and Oremland, R.S. 2009. Enrichment and isolation of Bacillus beveridgei sp. nov., a facultative anaerobic haloalkaliphile from Mono Lake California that respires oxyanions of tellurium, selenium, and arsenic. Extremophile 13:695-705 |
| 2009 | Stolz, J.F., Reid, R.P., Visscher, P.T., Decho, A.W., Norman, R.S., Aspen, R.J., Bowlin, E.M., Franks, J., Foster, J.S., Paterson, D.M., Przekop, K.M. Underwood, G.J.C., and Prufert-Bebout, L. 2009. The microbial communities of the modern marine stromatolites at Highborne Cay, Bahamas. Atoll Res. Bull. Issue 567 pp. 1-28 |
| 2009 | Richey, C., Chovanec, P., Hoeft, S.E., Oremland, R.S., Basu, P., and Stolz, J.F. (2009) Respiratory Arsenate Reductase as a Bidirectional Enzyme. Biochem Biophy Res Comm382:298-302 |
| 2009 | Mailloux, B. J., Alexandrova, E., Keimowitz, A., Wovkulich, K., Freyer, G. Herron, M., Stolz, J. F., Kenna, T., Pichler, T., Polizzotto, M., Dong, H., Bishop, M., and Knappett, P. 2009. Microbial Mineral Weathering for Nutrient Acquisition Releases Arsenic. Appl. Environ. Microbiol. 75:2558-2565 |
| 2008 | Paterson, D.M., Aspden, R.J., Visscher, P.T., Consalvey, M., Andres, M.S., Decho, A.W., Stolz, J., and Reid, R.P. (2008) Light-Dependant Biostabilisation of Sediments by Stromatolite Assemblages. PloSBiology 3(9): e3176 doi:10.1371/journal.pone.0003176 |
| 2008 | Kulp, T.R., Hoeft, S.E., Madigan, M., Hollibaugh, J.T., Fischer, J., Stolz, J.F., Culbertson, C.W., Miller, L.G., and Oremland, R.S. (2008) Arsenic(III) fuels anoxygenic photosynthesis in hot spring biofilms from Mono Lake, California. Science 321:967-970 |
| 2007 | Miller, W.G., Parker,C.T., Rubenfield,M., Mendz, G.L., Wosten, M.S.M.M., Ussery, D.W., Stolz,J.F., Binnewies,T.T., Hallin,P.F., Wang,G., Malek,J.A., Rogosin,A., Stanker,L.H., Mandrell, R.E. (2007) The complete genome sequence and analysis of the human pathogen Arcobacter butzleri. PLoS ONE 2(12): e1358 doi:10.1371/journal.pone.0001358 |
| 2007 | Hoeft, S.E., Switzer Blum, J., Stolz, J.F., Tabita, F.R., Witte, B., King, G.M., Santini, J.M., and Oremland, R.S. 2007. Alkalilimnicola ehrlichii, sp. nov. a novel aresnite-oxidizing halophylic gamma proteobacterium capable of chemoautotrophic or heterotrophic growth with nitrate or oxygen as the electron acceptor. Sys. Appl.Microbiol. Int. J. Sys. Evol. Microbiol.57: 504-512 |
| 2007 | Stolz, J.F., Perera, E., Kilonzo, B., Kail, B., Crable, B., Fisher, E., Ranganathan, M., Wormer, L., and Basu, P. 2007. Biotransformation of 3-nitro-4-hydroxybenzene arsonic acid and release of inorganic arsenic by Clostridium species. Environ. Sci. Tech. 41:818-823. |
| 2006 | Stolz, J.F., Basu, P., Santini, J.M., and Oremland, R.S. 2006. Selenium and arsenic in microbial metabolism. Annu. Rev. Microbiol. 60:107-130 |
| 2005 | Oremland, R.S., Capone, D.G., Stolz, J.F, and Fuhrman, J. Whither or Wither Geomicrobiology in the era of “Community Metagenomics”. Nature Microbiol. Revs. 3:572-578 |
| 2005 | Oremland, R.S., Kulp, T.R., Switzer Blum, J. Hoeft, S.E., Baesman, S., Miller, L.G., and Stolz, J.F. A microbial arsenic cycle in a salt-saturated, extreme environment: Searles Lake, California. Science. 308:1305-1308 |
| 2005 | Oremland, R.S., and Stolz, J.F. Arsenic, microbes, and contaminated aquifers.Trends in Microbiology.13:45-49 |
| 2004 | Hoeft, S.E., T.R. Kulp, J.F. Stolz, J.T. Hollibaugh, and R.S. Oremland. Dissimilatory arsenate reduction with sulfide as the electron donor: Experiments with Mono Lake water and isolation of strain MLMS-1, a chemoautotrophic, arsenate-respirer. App. Environ. Microbiol. 70: 2741 - 2747. |
| 2004 | Oremland, R.S., Stolz, J.F., and Hollibaugh, J.T. The microbial arsenic cycle in Mono Lake, California. FEMS Microbiol. Ecol. 48:15-27 |
| 2004 | Visscher, P.T. and Stolz, J.F. Microbial mats as bioreactors: populations,processes, and products. Palaeogeography, Palaeoclimatology, Palaeoecology 218:87-100 |
| 2003 | Oremland, R.S., and Stolz, J.F. 2003. The ecology of arsenic. Science 300:939-944 |
| 2003 | Afkar, E., Basu, P., Oremland, R.S., and Stolz, J.F. 2003. Purification and characterization of the dissimilatory arsenate reductase from Bacillus selenitireducens. J. Biol. Chem. (in preparation). |
| 2003 | Vanden Hoven, R. N., Stolz,J.F., Stanisich, V.A.,, and Santini, J.M. 2003. Characterisation of the arsenite oxidation abilities of two phylogenetically distinct arsenite-oxidizing bacteria. Arch. Microbiol. (submitted). |
| 2003 | Newman, D.K., Afkar, E., Saltikov, C., Kail, B., Oremland, R.S., and Stolz, J.F., 2003. A novel metalloid reductase from the dissimilatory arsenate-reducing bacterium Sulfurospirillum barnesii strain SES-3 Appl. Environ. Microbiol. (submitted). |
| 2002 | Stolz, J.F., Basu, P., and Oremland, R.S. 2002. Microbial transformation of elements: the case for arsenic and selenium. Int. Microbiol. 5:201-207. |
| 2002 | Herbel, M.J., Switzer Blum, J., Hoeft, S.E., Cohen, S.M., Arnold, L.L., Lisak, J., Stolz, J.F., and Oremland. R.S., 2002*. Dissimilatory Arsenate reductase activity and arsenate-respiring bacteria in bovine rumen fluid, hamster feces, and the termite hindgut. FEMS Microbiol. Ecol. 41:59-67. |
| 2002 | Stolz, J.F. and Bazu, P. 2002. Evolution of nitrate reductase: Molecular and Structural Variations on a Common Function. ChemBioChem. 3:101-109. |
| 2002 | Santini, J.M., Stolz, J.F., and Macy, J.M. Macy, 2002. Isolation of a new arsenate-respiring bacterium - physiological and phylogenetic studies. Geomicrobiol. 19:41-52. |
| 2001 | Switzer Blum, Stolz, J.F., Oren, A., and Oremland, R.S. 2001. Selenihalobacter shriftii, gen. nov. sp. nov., a halophilic anaerobe from Dead Sea sediments that respires selenate. Arch. Microbiol. 175:208-219. |
| 2001 | Stolz, J.F., Feinstein, T.N.,.Salsi, J., Visccher, P.T., and Reid, R.P 2001 TEM analysis of microbial mediated sedimentation and lithification in a modern marine stromatolite Am. Min. 86:826-833. |
| 2001 | Senko, J., and Stolz, J.F., 2001. Iron dependent nitrate reduction in the dissimilatory iron-reducing bacterium Geobacter metallireducens. Appl.Environ. Microbiol.67:3750-3752. |
| 2001 | Stolz, J.F., Reid, R.P., Salsi, J., Visccher, P.T., and Feinstein, T.N., 2001. TEM analysis of microbial mediated sedimentation and lithification in a modern marine stromatolites Am. Min.86:826-833 |
| 2000 | Switzer Blum, Stolz, J.F., Oren, A., and Oremland, R.S. 2000. Selenihalobacter shriftii, gen. nov. sp. nov., a halophilic anaerobe from Dead Sea sediments that respires selenate. Arch. Microbiol. 175:208-219. |
| 2000 | Reid, R.P., Visscher, P.T., Decho, A.W., Stolz, J.F., Bebout, B., Dupraz, C., MacIntyre, I., Pearl, H.W., Pinckney, J., Prufert-Bebout, L., Steppe, T., and Des Marais, D., 2000. The role of microes in accretion, lamination, and early lithification in modern marine stromatolites. Nature 406:989-992 |
| 1999 | Martinez Murillo, F., T. Gugliuzza, J. Senko, Basu, P., and Stolz, J.F., 1999. A heme C-containing enzyme complex that exhibits nitrate and nitrite reductase activity from the dissimilatory iron reducing bacterium Geobacter metallireducens. Arch. Microbiol. 172:313-320. |
| 1999 | Oremland, R.S., Switzer Blum, J., Burns Bindi, A., Dowdle, P.R., Herbel, M., and Stolz, J.F. 1999. Simultaneous reduction of nitrate and selenate by cell suspensions of Se-respiring bacteria. Appl. Environ. Microbiol. 65:4385-4392. |
| 1999 | Stolz, J.F. and Oremland, R.S., 1999. Bacterial arsenate and selenate reduction. FEMS Microbial Revs 23:615-627 |
| 1999 | Stolz, J.F., Ellis, D.J., Switzer Blum, J., Ahmann, D., Lovley, D.R. Oremland, R.S., 1999. Sulfurospirillum barnesii sp. nov., Sulfurospirillum arsenophilus sp. nov., and the Sulfurospirillum clade in the Epsilon Proteobacteria. Int. J. Syst. Bacteriol. 49:1177-1180. |
| 1998 | Switzer Blum, J., A.B. Bindi, J. Buzzelli, J.F. Stolz, and R.S. Oremland. 1998. Bacillus arsenoselenatis sp. nov., and Bacillus selenitireducens sp. nov.: two haloalkaliphiles from Mono Lake, California, which respire oxyanions of selenium and arsenic. Arch. Microbiol. 171:19-30. |
| 1997 | Stolz, J.F., Gugliuzza, T., Switzer-Blum, J., Oremland, R., and Martinez-Murillo, F., 1997. Differential cytochrome content and reductase activity in Geospirillum barnesii strain SeS3. Arch. Microbiol. 167:1-5. |
| 1995 | Cahill, A.D., and Stolz, J.F., 1995. Polyclonal antibodies to chlorosome proteins as probes for green sulfur bacteria. Appl. Environ. Microbiol. 61:784-787. |
| 1994 | Caccavo, F. Jr., Lonergan, D.J., Lovley, D.R., Davis, M., Stolz, J.F., and McInerney, M.J., 1994. Geobacter sulfurreducens sp. nov., a hydrogen and acetate oxidizing dissimilatory metal-reducing microorganism. Appl. Environ. Microbiol. 60:3752- 3759. |
| 1993 | Stolz, J.F. , 1993. Magnetosomes: A Review. J. Gen. Microbiol. 139:1663-1670. |
| 1993 | Naik, R.N., Murillo, F.M., and Stolz, J.F., 1993. Evidence for a novel nitrate reductase inGeobacter metallireducens. FEMS Microbiol Lett 106:53-58. |
| 1990 | Margulis, L., Hinkle, G., Stolz, J., Craft, F., Esteve, I., and Guerrero, R.. 1990. Mobilifilum chasei: Morphology and ecology of a spirochete from an intertidal stratified microbial mat community. Arch. Microbiol. 153:422-427. |
| 1990 | Stolz, J.F., 1990. Distribution of phototrophic microbes in the stratified microbial community at Laguna Figueroa, Baja California, Mexico. BioSystems 23:345-357. |
| 1990 | Stolz, J.F., Lovley, D.R., and Haggerty, S.E., 1990. Biogenic magnetite and the magnetization of sediments. J. Geophys. Res. 95:4355-4362. |
| 1990 | Stolz, J.F., Redlinger, T.E., and Fuller, R.C., 1990. Pigment-protein diversity in chlorosomes from green bacteria. Arch Microbiol 154:422-427. |
| 1989 | Chang, S-B.R., Stolz, J.F., Awramik, S.M., and Kirschvink, J.L., 1989. Biogenic magnetite in stromatolites: Occurrence in ancient stromatolites and cherts. Precambrian Res. 43:305-315. |
| 1989 | Stolz, J.F., Chang, S-B.R., and Kirschvink, J.L., 1989. Biogenic magnetite in stromatolites: I. Occurrence in modern sedimentary environments. Precambrian Res. 43:295-304. |
| 1987 | Nicholson, J.A.M., Stolz, J.F., and Pierson, B.K., 1987. Structure of a microbial mat in a saltmarsh. FEMS Micro. Ecol. 45:343-364. |
| 1987 | Lovley, D.R., Stolz, J.F., Nord, G.L., and Phillips. E.J.1987. Anaerobic production of magnetite by a dissimilatory iron-reducing microorganism. Nature 330:252-254. |
| 1987 | Chang, S-B.R., Stolz, J.F., and Kirschvink, J.L., 1987. Biogenic magnetite as a primary remanence carrier in limestone. Phys. Earth Planet. Sci. 46:289- 303. |
| 1986 | Stolz, J.F., Chang, S-B.R., and Kirschvink, J.L., 1986. Magnetotactic bacteria and single domain magnetite in hemipelagic sediments. Nature 321:849-851. |
| 1985 | Fracek, S.P., and Stolz, J.F., 1985. Spirochaeta bajacaliforniensis Sp.n. from a microbial mat community at Laguna Figueroa, Baja California Norte, Mexico. Archives of Microbiol. 142:317-325. |
| 1985 | Stolz, J.F., 1985. The stratified microbial community at Laguna Figueroa, Baja California, Mexico: from miles to microns. Origins of Life 15:347-352. |
| 1984 | Stolz, J.F., 1984. Succession in a microbial mat community: a gaian perspective. Advances in Space Research 4:203-206. |
| 1984 | Margulis, L., and Stolz, J.F., 1984. Cell symbiosis theory: status and implications for the fossil record. Advances in Space Research 4:195-201. |
| 1984 | Lopez-Cortez, A., Margulis, L., and Stolz, J.F., 1984. Las comunidades microbianas estratificados de Baja California Norte. Ciencia y desarrollo 59:45-52. |
| 1984 | Stolz, J.F., and Margulis, L., 1984. The stratified microbial community at Laguna Figueroa, Mexico: A possible model for prePhanerozoic microbial communities preserved in cherts. Origin of Life 14:671-679. |
| 1983 | Stolz, J.F., 1983. Fine structure of the stratified microbial community at Laguna Figueroa, Baja California, Mexico: I. Methods of in situ study of the laminated sediments. Precambrian Res. 20:479-492. |
| 1983 | Read, L., Margulis, L., Stolz, J.F., Obar, R., and Sawyer, T.K., 1983. A new strain of Paratetramitus jugosus from Laguna Figueroa, Baja California, Mexico. Biological Bulletin 165:241-264. |
| 1983 | Margulis, L., Grosovsky, B.D.D., Stolz, J.F., Gong-Collins, E.J., Lenk, S., Read, D., and Lopez-Cortez, A., 1983. Distinctive microbial structures and the pre- Phanerozoic fossil record. Precambrian Res 20:443-477. |
| 1980 | Margulis, L., Barghoorn, E.S., Giovannoni, S., Chase, D., Banerjee, S., Francis, S., Ashendorf, D., and Stolz, J., 1980. The microbial community at Laguna Figueroa, does it have Precambrian analogues? Precambrian Res 11:93-123. |
| 1978 | Margulis, L., Thorington, G., Berger, B., and Stolz, J., 1978. Endosymbiotic bacteria associated with the intracellular green algae of Hydra viridis. Current Microbiol. 1:227-232. |
| 2017 | Stolz, J.F. 2017. Climate Change and the Gaia Hypothesis. In Magill, G. (ed.) “The Urgency of Climate Change: Interdisciplinary Perspectives. Cambridge Scholars Publishing, Cambridge UK |
| 2015 | Stolz, J.F. 2015. Geomicrobiology of selenium and tellurium. In. Erhlich, H. “Geomicrobiology” 6th edition. |
| 2012 | Oremland, R.S., Stolz, J.F., and Saltikov, C.W. 2012 Anaerobic oxidation of arsenite [As(III)] by autotrophic bacteria: the view from Mono Lake, California. In Santini, J.M. and Ward, S.A. (eds) Arsenic in the Environment, pp. 73-80, CRC Press, Boca Raton |
| 2012 | Stolz, J.F. 2012 Overview of arsenic metabolism and resistance. In Santini, J.M. and Ward, S.A. (eds) Arsenic in the Environment, pp 55-60, CRC Press. Boca Raton |
| 2011 | Chovanec, P., Basu, P., and Stolz, J.F. (2011) Application of Proteomics in Bioremediation. In Stolz J.F. and Oremland, R.S. (eds.) “Microbial Metabolism of Metal and Metalloids: Advances and Applications”, ASM Press, Washington DC |
| 2011 | Stolz, J.F., Berekaa, M.M., Fisher, E., Polshyna, G., Thangavelu, M., Dheer, R., Ranganathan, M., Garcia Moyano, A., El Assar, S., and Basu, P. (2011) Methods for Detection of Arsenate Respiring Bacteria: Advances, Cautions, and Caveats. In Stolz J.F. and Oremland, R.S. (eds.) “Microbial Metabolism of Metal and Metalloids: Advances and Applications”, ASM Press |
| 2011 | Stolz, J.F., and Oremland, R.S., 2008. Selenium. In “Encyclopedia of Geobiology” Thiel, V. and Reitner, J (eds). Springer. |
| 2011 | Stolz, J.F., and Oremland, R.S., 2008. Arsenic. In “Encyclopedia of Geobiology” Thiel, V. and Reitner, J (eds). Springer. |
| 2010 | Franks, J., Reid, R.P., Aspen, R.J., Underwood, G.J.C., Paterson, D.M., Prufert-Bebout, L., and Stolz, J.F. (2010) Ooid accreting diatom communities from the modern marine stromatolites at Highborne Cay, Bahamas. In J. Seckbach and A. Oren (eds), Microbial Mats, Springer pp. |
| 2009 | Basu, P., Sparacino, C., Chovanec, P., and Stolz, J.F. 2009 Investigating Protein Expression in Bacteria Grown Under Different Growth Conditions. In “Integrated Lab”, Johnson, M. and Basu, P. (eds), DesTech Publishers. pp. 63-70 |
| 2008 | Fisher, E., Dawson, A.M., Polshnya, G., Lisak, J., Crable, B., Perera, E., Ranganathan, M, Thangavelu, M, Basu, P., and Stolz, J.F., 2008. Transformation of inorganic and organic arsenic by Alkaliphilus oremlandii sp. nov. strain OhILAs. In " Incredible Anaerobes: From Physiology to Genomics to Fuels" J. Wiegel, R. Maier and M. Adams (Eds.) Annals New York Academy of Sciences. pp. 230-241 |
| 2006 | Stolz, J.F., 2006. Bacterial intracellular membranes. Embryonic Encyclopedia ofLife Sciences, Nature Publishing Group, London, www.els.net. |
| 2005 | Stolz, J.F., Oremland, R.S., Paster, B.J., Dewhirst, F.E., and VanDamme, P. |
| 2004 | Santini, J.M., and Stolz, J.F. 2004. Prokaryote arsenate and selenate reduction. In M. M. Nakano and P. Zuber (eds) “Strict and facultative anaerobes: medical and environmental importance” Horizon Scientific Press pg. 239-250 |
| 2003 | Stolz, J.F. Structure of marine biofilms: Flat laminated mats and modern marine stromatolites. In "Fossil and Recent Biofilms: A natural history of the impact of life on this planet ", W.E. Krumbein, D.M. Paterson, and G. Zavarzin (eds), Kluwer Academic Publishers, Dordrecht. pgs 65-76 |
| 2001 | Oremland, R.S., Newman, D.K., Kail, B.W., and Stolz, J.F. Bacterial respiration of arsenate and its significance in the environment. In "Environmental Chemistry of Arsenic", W.T. Frankenberger Jr (ed), Marcel Dekker Inc., New York pp. 273-295 |
| 2000 | Stolz, J.F., 2000. The structure of microbial mats and biofilms. In "Microbial Sediments", Riding, R., and Awramik, S., (eds.), Springer pgs 1-8. |
| 2000 | Oremland, R.S., and Stolz, J.F. 2000. Dissimilatory reduction of selenate and arsenate in nature. In "Environmental metal-microbe interaction", D.R. Lovley (ed.), ASM Press, Washington DC. pgs 199-224. |
| 1999 | Stolz, J.F., 1999. Bacterial intracellular membranes. Encyclopedia of Life Sciences, Macmillan Reference Ltd, London www.els.net. |
| 1999 | Stolz, J.F., and Hesse, P., 1999. Bacterial magnetite and the quarternary climate record. In "Quarternary Climates and Magnetism", B. Maher and R. Thompson (ed.), Cambridge University Press. pgs 163-198. |
| 1996 | Wade, M.C., Stolz, J.F., and Ode, R., 1996. A study of the biodegradability of cyclohexylamine and dicyclohexylamine by aerobic biological treatment. In "Proceedings of the 28th Mid-Atlantic Industrial Waste Conference", A. Scott Weber (ed). Technomics Inc. |
| 1994 | Stolz, J.F. and Des Marais, D. 1994. New concepts in biogeochemical cycling and ecology. In "Microbial Mats: Structure, Development and Environmental Significance" L.J. Stal and P. Caumette (eds.) NATO ASI Series Vol. G 35, pp. 437-440. |
| 1994 | Stolz, J.F., 1994. Light and electron microscopy in microbial mat research: an overview. In "Microbial Mats: Structure, Development and Environmental Significance" L.J. Stal and P. Caumette (eds.), NATO ASI Series Vol. G 35, pp 173- 187. |
| 1993 | Stolz, J.F., 1993. Magnetogenic bacteria and the microbial iron cycle. In "Trends in Microbial Ecology" Guerrero, R. and Pedros-Alios, C. (eds.), Spanish Soc. Microbiol. 441-444. |
| 1992 | Stolz, J.F., 1992. Magnetotactic bacteria: ecology, sediment magnetism, and environmental indicator. In "Biomineralization Processes of Iron and Manganese", H.C.W. Skinner and Fitzpatrick, R.W. (eds),Catena Verlag. Supplement 21:133-145. |
| 1991 | Rhoads, D.C., Mulsow, S.G., Gutschick, R., Baldwin, C.T., and Stolz, J.F., 1991. The dysaerobic zone revisited: a magnetic facies. In "Proceedings of the Symposium on Modern and Ancient Continental Shelf Anoxia" Geol. Soc. of London, pp. 187-199. |
| 1991 | Stolz, J.F., 1991. Biomineralization and gaia. In "Scientists on Gaia", S. Schneider and P. Boston, (eds.), MIT Press. pp. 346-352. |
| 1990 | Stolz, J.F., 1990. Ecology of phototrophic prokaryotes, ibid. pp.105-112 |
| 1990 | Stolz, J.F., 1990. Introduction to the phototrophic prokaryotes and ultrastructural techniques used in their study. In "Structure of Phototrophic Prokaryotes", J.F. Stolz (ed), CRC Press, Boca Raton, pp. 1-14. |
| 1989 | Stolz, J.F., Botkin, D.B., and Dastoor, M.N., 1989. The Integral Biosphere. In "Global Ecology", M. Rambler, L. Margulis, and R. Fester (ed.), Academic Press, Boston, 31-50. |
| 1989 | Stolz, J.F., Chang, S-B.R., and Kirschvink, J.L., 1989. The effect of magnetotactic bacteria on the the magnetic properties of sediments. In "Origin, Evolution, and Modern Aspects of Biomineralization in Plants and Animals:, R.E. Crick (ed.), Plenum, NY. 497-506. |
| 1983 | Stolz, J.F., 1983. Fine structure of the stratified microbial community at Laguna Figueroa, Baja California, Mexico. II. Transmission electron microscopy as a diagnostic tool in studying microbial communities in situ. In "Microbial Mats: Stromatolites", Y. Cohen, R.W. Castenholz, and H.O. Halvorson (eds.), Alan Liss Co, NY 23-38. |
| 1983 | Stolz, J.F., 1983. Fine structure of the stratified microbial community at Laguna Figueroa, Baja California, Mexico. Ibid. 54-55. |
| 1983 | Margulis, L., and Stolz, J.F., 1983. Microbial systematics and a gaian view of the sediments. In "Biomineralization and Biological Metal Accumulation", P. Westbroek and E.W. DeJong (eds.) Reidel Publishers, Dordrecht, The Netherlands, 27-53. |
Stolz J.F. and Oremland, R.S. (eds.) 2011. “Microbial Metabolism of Metal and Metalloids: Advances and Applications”, ASM Press |
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| Stolz, J.F. (ed.) 1990. "Structure of Phototrophic Prokaryotes", CRC Press, Boca Raton, FL, 144 pages |
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LETTERS, TECHNICAL COMMENTS, REVIEWS
| 2009 | Oremland, R.S., Stolz, J.F., Madigan, M., Hollibaugh, J.T., Kulp, T.R., Hoeft, S.E., Fisher, J. Miller, L.G., Culbertson, C.W., and Asao, M. 2009. Response to comment on Arsenic(III) fuels anoxygenic photosynthesis in hot springbiofilms from Mono Lake, California. Science 323:583 doi 10.1126/science.1166435 |
| 2003 | Basu, P. and Stolz, J.F. 2003. Frontiers in Computational Genomics, Vol. 3. ChemBioChem 5:546-7 |
| 1999 | Stolz, J.F.Geomicrobiology: Interactions between microbes and minerals. Int. J. Microbiol. 1:240. |
| 1998 | Oremland, R.S., Stolz, J.F., and Lovley, D.R. "Green rust" in the lab and in the soil. Science 281:1111. |
| 1990 | Margulis, L., and Stolz, J.F. Scientific American 262:12. |
| 1989 | Lovley, D.R., and Stolz, J.F. Origin of soil magnetite. Nature 340:106 |
| 2018 | Goldschmidt Conference, Groundwater quality in Southwestern Pennsylvania with unconventional shale gas extraction and legacy coal mining" August 17 Montana State University "Arsenic induces structural and compositional colonic microbiome change" July 18 Seneca Nation Tribal Council "Significant impacts of fracking waste water". March 21 |
| 2017 | University of Pittsburgh, Department of Geology, “Gaia and her microbiome”, February 23. Hillman Cancer Center “Environmental impacts and emerging health concerns associated with unconventional natural gas extraction.” March 8. Phipps Conservatory, One Health One Planet Symposium. “Environmental impacts and emerging health concerns associated with unconventional natural gas extraction.” April 5. Engineering Sustainability 2017, Lawrence Convention Center, “Turning waste into energy in urban communities: biodigester technology in Pittsburgh”. April 10. Indiana University of Pennsylvania, Department of Biology, “Microbial arsenicmetabolism: new twists on a old poison”, September 8 |
| 2016 | The Pennsylvania State University, “Assessing Well Water Quality in Southwestern Pennsylvania”, Shale Gas Network Workshop, May 20 Goldschmidt Conference, “Microbial Metabolism of Arsenic and Selenium: Today and in the Past”, invited keynote speaker. June 27. Cologne University, “The Interdisciplinary Nature of Environmental Science”, 10th Annual International Consortium for Interdisciplinary Education about Health and the Environment, December 5 AGU Fall Meeting, “Microbial selenite reduction and the selenium biogeochemical cycle”, San Francisco, December 12 (invited) |
| 2015 | Maryland Branch ASM, Distinguished Lecturer “Life in the Frac Pitt: the microbiology of unconventional shale gas extraction”, February 11 Missouri and Missouri Valley ASM joint branch meeting, Distinguished Lecturer,“Microbial arsenic metabolism: new twists on a old poison”, March 27 South Carolina Branch ASM, Distinguished Lecturer “Microbes, minerals and metals: a microbes view of the periodic table”, April 10 Rocky Mountain, Intermountain, Rio Grande ASM joint branch meeting, Distinguished Lecturer, “Life in the Frac Pitt: the microbiology of unconventional shale gas extraction”, April 27 Duquesne University, “Climate Change and the Gaia Hypothesis”, Integrity of Creation: Climate Change Conference, October 1 Clemsen University, Biological Sciences, “The physiology and biochemistry of bacteria that transform metals and metalloids”, October 23 Cologne University, “Shale Gas: Is it Green and Sustainable”, 9th Annual International Consortium for Interdisciplinary Education about Health and theEnvironment, December 5 |
| 2014 | Theobald Smith Society (New Jersey ASM Branch) Distinguished Lecturer “Life in the Frac Pitt: the microbiology of unconventional shale gas extraction”, February 27 Rutgers University, Department of Biochemistry and Microbiology,“Stromatolites: 3.5 billions years of “geobiological” interactions”. February 28 Northern California Branch ASM, Distinguished Lecturer “Arsenic for life: newtwists on an old poison”” March 7 Northern California Branch ASM, Distinguished Lecturer “Life in the Frac Pitt: the microbiology of unconventional shale gas extraction”, March 8 Ohio Branch ASM Distinguished Lecturer “Life in the Frac Pitt: the microbiology of unconventional shale gas extraction”, April 12 Southern Illinois U. Department of Geology. “Life in the Frac Pitt: the microbiology of unconventional shale gas extraction”, April 28 Duquesne University, Forensics of Fracking Symposium, “Environmental impacts of unconventional shale gas extraction”, September 12 Allegheny Branch ASM, Distinguished Lecturer “Life in the Frac Pitt: the microbiology of unconventional shale gas extraction”, November 7 |
| 2013 | Facing the Challenges, Research on Shale Gas Extraction Symposium, conference organizer, November 25-26, Duquesne University |
| 2012 | C&E News/ThermoFisher Webinar, “Flowback and produced water analysis from Marcellus unconventional gas extraction with ICP-OES”, November 19 |
| 2012 | GSA Fall meeting, Chemical composition and microbial diversity of fluid associated with Marcellus shale gas extraction. October 27 |
| 2012 | Slippery Rock University, Biology Department, “Environmental impacts of unconventional shale gas drilling” September 13 |
| 2012 | Gordon Research Conference Geobiology, chair, Ventura CA, January 27-February 1 |
| 2012 | College of Wooster, Biology, “Environmental impacts of unconventional gas extraction in the Marcellus and Utica shale” October 22 and 23 |
| 2011 | C&E News/ThermoFisher Webinar, “Anion analysis of water associated with unconventional natural gas extraction” July 26 |
| 2011 | The Ohio State University, Engineering, “Arsenic- are microbes poisoning the water” April 27 |
| 2011 | University of Akron, Geosciences and Engineering, ““Arsenic for life: new twistson an old poison”” March 30 |
| 2011 | Gordon Research Conference Metals in Biology, “Arr, Aio, and Arx: Defining Electron Flow in Arsenic Oxidoreductases” January 26 |
| 2011 | University of Dayton, Geology Dep., “Environmental impacts of unconventional gas extraction in the Marcellus and Utica shale” November 4 |
| 2010 | Pittsburgh Chemistry Club “Arsenic for life: new twists on an old poison” September 27 |
| 2010 | Society of Industrial Microbiology, chair session on “Arsenic and Selenium Bioremediation” (Probing arsenic and selenium bioremediation using genomics and proteomics), July 28 |
| 2010 | Gordon Research Conference Geobiology, vice-chair, Ventura CA, January 31-February 4 |
| 2010 | Goldschmidt Conference, (The microbial transformation of arsenic in extreme environments). June 16-18, 2010 Knoxville TN |
| 2010 | SEPM Society for Sedimentary Geology (Flat laminated microbial mats and the sedimentary environment) conference on Microbial Mats in SiliclasticEnvironments, Denver CO, May 20-22 |
| 2010 | St. Vincent College (Environmental Sciences at Duquesne University) February 16 |
| 2009 | Niagara University, (The microbial transformation of arsenic: from genomes to geocycles), October 23 |
| 2009 | ASM Division Q Lecture (Microbial transformation of arsenic: new twists for an old poison) General Meeting, May 19 |
| 2009 | Old Dominion University, (Investigating microbial arsenic metabolism with genomics and proteomics), February 24 |
| 2009 | Los Alamos National Laboratory, (Microbial Transformation of Arsenic: From Geocycles to Genomes), January 27 |
| 2008 | Rutgers University, (Microbial transformation of arsenic: From genomes to geocycles), December 10 |
| 2008 | University of Pittsburgh, (Microbes, metals, and minerals: over 3.5 billion years of "geobiological" interactions), September 18 |
| 2008 | Waynesburg University, (A Microbes View of the Periodic Table), February 19 |
| 2008 | University of West Virginia, (Biogenesis of modern marine stromatolites at Highborne Cay, Bahamas), February 7 |
| 2007 | American Geophysical Union, Special session on “Trace metal interactions with submerged aquatic vegetation (SAV) and bacterial biofilms: The current state of experiment, theory, and modeling" (Probing for the Activities of Arsenic and Selenium Metabolizing Microbes), December 10 |
| 2007 | LaRoche College, (Arsenic: A Chicken Little Story) Global Problems: Global Solutions, workshop October 27 |
| 2007 | University of South Carolina, (Microbial Transformation of Arsenic: From Geocycles to Genomes), October 19 |
| 2007 | Montana State University (Microbial Transformation of Arsenic: From Geocycles to Genomes), January 22 |
| 2006 | Geological Society of America, Session on The Use of Molecular Techniques to Assess Microbial Community Structure and Function in Aquifer Systems , (Methods for Detection of Arsenic Metabolizing Bacteria) October 22 |
| 2006 | Aquifer Storage and Recovery Systems Workshop, Tampa Fl, February 22-24 |
| 2006 | University of Dayton, (Microbial Transformation of Arsenic: From Geocycle to Genomes) |
| 2005 | Old Dominion University, Ocean Sciences (Microbial transformation of arsenic: Geology to genomes) |
| 2004 |
Columbia University, Milkman School of Public Health (Microbial transformation of arsenic) |
| 2004 | University of South Florida, Geology Department (Microbial transformation of arsenic), |
| 2004 | Virginia Polytechnic Institute and State University, Geosciences Department, (Microbial transformation of arsenic), |
| 2003 | American Society of Agronomy, Crop Science Society of American, and SoilScience Society of American annual meeting |
| 2003 | Gordon Conference on Molybdenum and Tungsten Enzymes |
| 2003 | St. Vincent College, Department of Biology (Breathing arsenic: a novel mode of bacterial respiration) January 24th. |
| 2002 | University of Oklahoma, Department of Botany and Microbiology (Breathing arsenic: a novel mode of bacterial respiration) October 18th. |
| 2002 | TOPS workshop, Hawaii, June 23-24th. |
| 2002 | West Virginia University, Department of Microbiology (Bacteria that breath arsenic: a new twist for an old poison) |
| 2002 | Rutgers University, Microbiology and Biochemistry, (Bacterial Reduction of Nitrate, Selenate, and Arsenate: An Evolutionary Tale). |
| 2002 | University of Maine, Department of Biological Sciences (Bacteria that breath arsenic: a new twist for an old poison). |
| 2001 | International Symposium on "New Frontiers in Microbial Ecology", Fundación Ramón Areces, Barcelona, December 11-12, 2001 (Microbial transformation of elements: the cases for arsenic and selenium) |
| 2001 | Chatham College, Department of Biology (Bacteria that breath arsenic: a new twist for an old poison) |
| 2001 | TOPS workshop, Hawaii. |
| 2001 | Hanse Institute for Advanced Study Symposium: Fossil and Recent Biofilms, Carl Von Ossietzky Universitaet, Oldenburg Germany (Structure of Marine Biofilms) |
| 2001 | University of Pittsburgh, Department of Geology (Sedimentation and lithification in modern marine stromatolites) |
| 2000 | Marine Biological Laboratory, The Microbial World Teacher Workshop (Structure of microbial mats) |
| 2000 | International Symposium on Photosynthetic Prokaryotes (ISPP2000), Barcelona, Spain (Community structure in a modern marine stromatolite) |
| 2000 | American Society for Microbiology, General Meeting (Phylogeny and Biochemistry of Arsenate and Selenate Respiring Bacteria). |
| 1999 | Marine Biological Laboratory, BUMP (Magnetotactic sensory structures: of symbiotic origin?) |
| 1999 | Carnegie Mellon University, Chemical and Environmental Engineering (Arsenate and selenate respiring bacteria). |
| 1999 | Symposium on Environmental Engineering, University of Pittsburgh (The Three Rivers of Pittsburgh as a source for selenate-respiring bacteria). |
| 1999 | Drexel University, Department of Biosciences and Biotechnology (Arsenate and selenate respiring bacteria: more common than you think). |
| 1999 | University of Pittsburgh, Ecology and Evolution Group (Microbial respiration of selenium and arsenic oxyanions). |
| 1998 | U.S./German Symposium on Environmental Engineering, University of Pittsburgh (Microbial reduction of selenate and arsenate oxyanions) |
| 1998 | NASA Ames Research Center, Moffett Field, CA (New and novel bacterial respiratory terminal reductases) |
| 1998 | U.S. Geological Survey, Menlo Park, CA (New and novel bacterial respiratory terminal reductases :NO3, SeVI, and AsV) |
| 1998 | University of Hartford, ASM Microbial Discovery Workshop (Ecophysiology of magnetotactic bacteria) |
| 1997 | Gwenydd-Mercy College, ASM Microbial Discovery Workshop (Ecophysiology of magnetotactic bacteria). |
| 1997 | University of Dayton, Department of Biology (The novel nitrate reductase from Geobacter metallireducens: getting stranger and stranger). |
| 1997 | Tri-State Microbiology Teachers Conference, Duquesne University (Workshop: Using internet resources for teaching microbiology). |
| 1997 | Tri-State Microbiology Teachers Conference, Duquesne University, (Biofilms: A paradigm for microbial ecology). |
| 1997 | University of Pittsburgh. Environmental and Civil Engineering Department. (The biogeochemistry of Geobacter metallireducens and Geospirillum barnesii). |
| 1996 | Michigan Technological University. Department of Biological Sciences (Metal munching microbes: the biogeochemistry of Geobacter metallireducens and Geospirillum barnesii). |
| 1995 | University of Dayton, Department
of Biology (The novel nitrate reductase of Geobacter metallireducens). |
| 1995 | California Academy of Science, Sierra Nevada Biodiversity Symposium (The global life support system). |
| 1994 | Indiana University of Pennsylvania, Department of Biology (Magnetotactic bacteria and their magnetic personalities). |
| 1994 | New College, University of Virginia, Science and Society Spring Lecture (Gaia, the environment and humankind: are we fooling with mother nature) |
| 1993 | Lehigh University, Earth
and Environmental Sciences (Magnetogenic bacteria and their effects
on sediments). |
| 1993 | Eight Annual Permaculture Symposium, Prospect PA (Gaian Interactions) . |
| 1993 | Mount Saint Mary's College, MD, Department of Biology, (Ecophysiology of magnetogenic bacteria). |
| 1993 | NATO Microbial Mat Meeting, Arcachon, France (Light and electron microscopy in microbial mat research: an overview). |
| 1993 | American Association for the Advancement of Science, annual meeting, Boston, MA (Microbial transformations in forest ecosystems: implications for geophysical processes). |
| 1992 | Sixth International Symposium on Microbial Ecology, Barcelona, Spain (Magnetogenic bacteria and the microbial iron cycle). |
| 1992 | Rock Magnetic Workshop, Santa Fe, N.M. (Biogenic magnetic minerals in sediments). |
| 1992 | American Chemical Society , Annual Meeting, San Francisco, (Reductases of Geobacter metallireducens) |
| 1991 | Wheeling Jesuit College, Department of Biology, (Ecology of green bacteria) |
| 1991 | Allegheny Branch ASM, Annual Meeting, Salt Fork State Park, Ohio (Recent developments in magnetogenic bacteria). |
| 1991 | American Geophysical Union, Annual Meeting, Baltimore, (Biogenic oxides). |
| 1991 | California University of Pennsylvania, Department of Biology, (Ecology of magnetogenic bacteria). |
| 1990 | Allegheny Branch ASM, Annual Meeting, Penn. State U., (Ecology of magnetotactic bacteria). |
| 1990 | University of Pittsburgh, Department of Geology, (Ferrimagnetic mineral forming bacteria and their magnetic personality). |
| 1990 | American Chemical Society, Annual Meeting, Miami, (Biogenic magnetite and the magnetization of sediments. |
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| 1990 | Allegheny Branch, American Society of Microbiology |
| 1985 | American Geophysical Union |
| 1985 | American Society of Microbiology |
| 1985 | International Society for the Study of the Origin of Life |
| 1982 | American Association for the Advancement of Science (AAAS) |
| 1980 | New York Academy of Science |
COMMITTEES AND EDITORIAL ASSIGNMENTS
| Board of Directors, RiverQuest (formally Pittsburgh Voyager) (V.P. 1999-2003, Secretary 2003-) | ||
| Frontiers in Microbial Physiology and Metabolism (2010-) | ||
| Frontiers in Extreme Microbiology (2010-) | ||
| Editorial Board, Applied and Environmental Microbiology (2005-) | ||
| Editorial Board, Geomicrobiology Journal (2005-) | ||
| Editorial Board, Journal International Microbiology (1998-) | ||
International Committee on Systematic Bacteriology Subcommittee on the Taxonomy of Campylobacter and related bacteria (2009-) |
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| Region III Branch Coordinator, American Society of Microbiology (1999-2004) | ||
| EPA/NIEHS Superfund Panel (1999, 2004, 2010) | ||
| NSF Microbial Observatories Panel (1999,2001) | ||
| International Steering Committee, Microcosmos Project, Boston University | ||
| ASM Precollege Committee (1997-2000) | ||
| NSF Postdoctor Fellowships Biosciences Related to the Environment Panel (1997-98) | ||
| President, Allegheny Branch, American Society of Microbiology (1996-1998) | ||
| Sponsor,
NASA Planetary Biology Internship Program, MBL, Woods Hole, MA
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Graduate Student Committees: |
Nancy Stemmler (1991, non-thesis), Mercy Ekbo-Asambe (1993), Sheila Davis (1993), Qing Ye (1993), Jianping Zhang (1993), Meir Sacks (1994, non-thesis), Laura Mackey (1994), Michelle Baxter (1994, non-thesis), Vincent Blanche (1994), Tom Curtis (1994, Department of Biology, U. Pittsburgh), Jaqueline Brooks (1995), Wei Du (1995), Jay Rao (1995), Denise Schmidt (1995), Marlene Carnecki (1995), Mark Piazza (1997), Jai Li (1997), Debra Misencik (1997), David Castric (non-thesis, 1997), Sherri Breier (1998), Philip Foret (1998), Joline Ness (1998), Cecelia McGough (non-thesis, 1998), Mark Marshall (1999), Steve Gerun (non-thesis, 2000), James Smedly (2001), Robert VanderWeele (2002), Jamie Skoloda (2004), Alan Kotun (2007), Kathryn Boone (2011), Naudia Martone (2011), Meghan Pascuzzi (2011), Megan Morrissey (2014), Laura Howell (2015), Tony Honick (2016), Jackie Shane (2016) PhD qualifying exams: Jennifer Bennet (2002), Joseph Horzempa (2003), Jennifer Hall (2004), Laura Howell (2008) , Tony Honick (2012) |
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